All modules for which code is available
- mhcflurry.allele_encoding
- mhcflurry.amino_acid
- mhcflurry.calibrate_percentile_ranks_command
- mhcflurry.class1_affinity_predictor
- mhcflurry.class1_neural_network
- mhcflurry.class1_presentation_predictor
- mhcflurry.class1_processing_neural_network
- mhcflurry.class1_processing_predictor
- mhcflurry.cluster_parallelism
- mhcflurry.common
- mhcflurry.custom_loss
- mhcflurry.data_dependent_weights_initialization
- mhcflurry.downloads
- mhcflurry.downloads_command
- mhcflurry.encodable_sequences
- mhcflurry.ensemble_centrality
- mhcflurry.fasta
- mhcflurry.flanking_encoding
- mhcflurry.hyperparameters
- mhcflurry.local_parallelism
- mhcflurry.percent_rank_transform
- mhcflurry.predict_command
- mhcflurry.predict_scan_command
- mhcflurry.random_negative_peptides
- mhcflurry.regression_target
- mhcflurry.scoring
- mhcflurry.select_allele_specific_models_command
- mhcflurry.select_pan_allele_models_command
- mhcflurry.select_processing_models_command
- mhcflurry.testing_utils
- mhcflurry.train_allele_specific_models_command
- mhcflurry.train_pan_allele_models_command
- mhcflurry.train_presentation_models_command
- mhcflurry.train_processing_models_command